title: "Using blindspiker"output: rmarkdown::html_vignettevignette: >%\VignetteIndexEntry | Sample test data | Test data must haves: | Test data optional extras: | Laboratory results data | Laboratory results must haves: | Laboratory results optional extras: | Details
Package: blindspiker 0.2.1
blindspiker: Laboratory Blind Spike Sample Analyses
A blind spike program provides samples to a laboratory in order to perform quality control (QC) checks. The samples provided are of a known quantity to the tester. The laboratory is typically uninformed of that the sample provided is a QC sample.
Authors:
blindspiker_0.2.1.tar.gz
blindspiker_0.2.1.zip(r-4.7)blindspiker_0.2.1.zip(r-4.6)blindspiker_0.2.1.zip(r-4.5)
blindspiker_0.2.1.tgz(r-4.6-any)blindspiker_0.2.1.tgz(r-4.5-any)
blindspiker_0.2.1.tar.gz(r-4.7-any)blindspiker_0.2.1.tar.gz(r-4.6-any)
blindspiker_0.2.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
blindspiker/json (API)
| # Install 'blindspiker' in R: |
| install.packages('blindspiker', repos = c('https://markhogue.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/markhogue/blindspiker/issues
Last updated from:4282e93a40. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 118 | ||
| source / vignettes | OK | 185 | ||
| linux-release-x86_64 | OK | 119 | ||
| macos-release-arm64 | OK | 74 | ||
| macos-oldrel-arm64 | OK | 98 | ||
| windows-devel | OK | 77 | ||
| windows-release | OK | 77 | ||
| windows-oldrel | OK | 83 | ||
| wasm-release | OK | 115 |
Exports:%>%bs_prep_and_analysisplot_qqplot_runplot_tatspike_combostable_falsetable_spike
Dependencies:base64encbigDbinGroupbitopsbslibcachemclicommonmarkcpp11curldigestdplyrevaluatefarverfastmapfontawesomefsgenericsggplot2gluegmpgtgtablehighrhtmltoolshtmlwidgetsisobandjquerylibjsonlitejuicyjuiceknitrlabelinglifecyclelitedownmagrittrmarkdownmemoisemimepartitionspillarpkgconfigpolynompurrrR6rappdirsrbibutilsRColorBrewerRcppRdpackreactablereactRrlangrmarkdownS7sassscalessetsstringistringrtibbletidyrtidyselecttinytexutf8V8vctrsviridisLitewithrxfunxml2yaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Load data associated with the spiked samples and laboratory results from comma separated variable text files. | bs_prep_and_analysis |
| Example Laboratory Values | labvals |
| quantile-quantile plot | plot_qq |
| Plot Run Chart | plot_run |
| Plot turnaround time | plot_tat |
| Count combinations of spiked samples | spike_combos |
| Example Spike Values | spikevals |
| Make table of false positives and false negatives in laboratory results | table_false |
| Make table summarizing the blind spikes. | table_spike |
